Three-dimensional (3D) modelling to determine the weight of massive corals in Gili Labak Island, Sumenep, Madura, East Java, Indonesia

D. Irawan, ,- and Akhmad Taufiq Mukti, ,- and S. Andriyono, ,- and F. F. Muhsoni, ,- (2023) Three-dimensional (3D) modelling to determine the weight of massive corals in Gili Labak Island, Sumenep, Madura, East Java, Indonesia. BIODIVERSITY, - (-). ISSN -

[img] Text (Artikel)

Download (12MB)
[img] Text (Plagiasi)

Download (5MB)
[img] Text (Korespondensi)

Download (12MB)
[img] Text (Penilaian Karil dan Kesesuaian Bidang Ilmu)
C1.1-32 Karil Jurnal Ilmiah-20.pdf

Download (648kB)
[img] Text (Keterangan Etik)
20-3. SK No. 961-20.pdf

Download (1MB)
Official URL:


This study aimed to non-destructively measure the weight of massive (live) corals through threedimensional (3D) modelling. The 3D models were constructed using the volumes and weight of massive (dead) corals. The study was conducted through photographs, 3D analysis, and weighing 32 massive (dead) coral samples. Volume and weight were modelled using linear and non-linear regressions, and their accuracy was tested using root mean square error (RMSE) and mean absolute percentage error (MAPE). This study showed that the weight of massive (live) corals could be measured using a 3D model of the massive (dead) coral’s volume and the weight mainly through regression, polynomial, and geometric equations. The power/geometric equation is a more suitable approach for determining the actual value of coral weight. Linear regression obtained an average weight of 6.13 kg per plot. Three-dimensional modelling can be widely applied to measure the massive corals in the deep sea.

Item Type: Article
Uncontrolled Keywords: A Comparison of Classification Techniques for 3D Reconstructions of Cold-Water Coral Reefs and Seabed.” Frontiers in Marine Science 8: 640713. doi:10.3389/fmars. 2021.640713.Dickens, L. C., Christopher H. R. Goatley, J. K. Tanner, D. R. Bellwood, and Richard K. F. Unsworth. 2011. “Quantifying Relative Diver Effects in Underwater Visual Censuses.” PLoS ONE 6 (4): 6–8. doi:10.1371/journal.pone. 0018965.Figueira, W., R. Ferrari, E. Weatherby, A. Porter, S. Hawes, and M. Byrne. 2015. “Accuracy and Precision of Habitat Structural Complexity Metrics Derived from Underwater Photogrammetry.” Remote Sensing 7 (12): 16883–16900. doi:10.3390/rs71215859.Fukunaga, A., and J. H. R. Burns. 2020. “Metrics of Coral Reef Structural Complexity Extracted from 3D Mesh Models and Digital Elevation Models.” Remote Sensing 12 (17): 1–18. doi:10.3390/RS12172676.Gurchiek, R. D., R. S. McGinnis, A. R. Needle, J. M. McBride, and H. van Werkhoven. 2017. “The Use of A Single Inertial Sensor to Estimate 3-Dimensional Ground Reaction Force during Accelerative Running Tasks.” Journal of Biomechanics 61: 263–268. doi:10.1016/j.jbiomech.2017.07.035.Hatcher, G. A., J. A. Warrick, A. C. Ritchie, E. T. Dailey, D. G. Zawada, C. Kranenburg, and K. K. Yates. 2020. “Accurate Bathymetric Maps from Underwater Digital Imagery without Ground Control.” Frontiers in Marine Science 7: 1–20. doi:10.3389/fmars.2020.00525.Hoegh-Guldberg, O., L. Pendleton, and A. Kaup. 2019. “People and the Changing Nature of Coral Reefs.” Regional Studies in Marine Science 30: 100699. doi:10. 1016/j.rsma.2019.100699.House, J. E., V. Brambilla, L. M. Bidaut, A. P. Christie, O. Pizarro, J. S. Madin, and M. Dornelas. 2018. “Moving to 3D: Relationships between Coral Planar Area, Surface Area and Volume.” PeerJ 6: e4280. doi:10.7717/peerj.4280.Kabiri, K., H. Rezai, and M. Moradi. 2020. “A Drone-Based Method for Mapping the Coral Reefs in the Shallow Coastal Waters – Case Study: Kish Island, Persian Gulf.” Earth Science Informatics 13 (4): 1265–1274. doi:10.1007/ s12145-020-00507-z.Kleypas, J., D. Allemand, K. Anthony, A. C. Baker, M. W. Beck, L. Z. Hale, N. Hilmi, et al. 2021. “Designing A Blueprint for Coral Reef Survival.” Biological Conservation 257: 109107. doi:10.1016/j.biocon.2021.109107.Kornder, N. A., J. Cappelletto, B. Mueller, M. J. L. Zalm, S. J. Martinez, M. J. A. Vermeij, J. Huisman, and J. M. de Goeij. 2021. “Implications of 2D versus 3D Surveys to Measure the Abundance and Composition of Benthic Coral Reef Communities.” Coral Reefs 40: 1137–1153. doi:10.1007/s00338.Lange, I. D., C. T. Perry, and N. Cooper. 2020. “A Quick, Easy, and Non-Invasive Method to Quantify Coral Growth Rates Using Photogrammetry and 3D Model Comparisons.” Methods in Ecology and Evolution 11 (6): 714–726. doi:10. 1111/2041-210X.13388.Leujak, W., and R. F. G. Ormond. 2007. “Comparative Accuracy and Efficiency of Six Coral Community Survey Methods.” Journal of Experimental Marine Biology and Ecology 351 (1–2): 168–187. doi:10.1016/j.jembe.2007.06. 028.Nabillah, I., and I. Ranggadara. 2020. “Mean Absolute Percentage Error for Evaluation of Prediction Result of Marine Commodity.” JOINS (Journal of Information System) 5 (2): 250–255. doi:10.33633/joins.v5i2.3900.Reichert, J., J. Schellenberg, P. Schubert, and T. Wilke. 2016. “3D Scanning as a Highly Precise, Reproducible, and Minimally Invasive Method for Surface Area and Volume Measurements of Scleractinian Corals.” Limnology and Oceanography: Methods 14 (8): 518–526. doi:10.1002/ lom3.10109.Scott, A. J., D. W. Hosmer, and S. Lemeshow. 1991. “Applied Logistic Regression.” Biometrics 47 (4): 1632. doi:10.2307/ 2532419.Stal, C., J. Bourgeois, P. De Maeyer, G. De Mulder, A. De Wulf, R. Goossens, M. Hendrickx, T. Nuttens, and B. Stichelbaut. 2012. “Test Case on the Quality Analysis of Structure from Motion in Airborne Applications.” Proceedings of the 32nd EARSeL Symposium: ‘Advances in Geosciences’, Mykonos, Greece, May 11.Suprayogi, I., Trimaijon, and Mahyudin. 2014. “Model Prediksi Liku Kalibrasi Menggunakan Pendekatan Jaringan Saraf Tiruan (ZST) (Studi Kasus: Sub DAS Siak Hulu).” Jurnal Online Mahasiswa Fakultas Teknik Universitas Riau 1 (1): 1–18.Veal, C. J., M. Carmi, M. Fine, and O. Hoegh-Guldberg. 2010. “Increasing the Accuracy of Surface Area Estimation Using Single Wax Dipping of Coral Fragments.” Coral Reefs 29 (4): 893–897. doi:10.1007/s00338-010-0647-9.Westoby, M. J., J. Brasington, N. F. Glasser, M. J. Hambrey, and J. M. Reynolds. 2012. “Geomorphology Structure-from- Motion Photogrammetry: A Low-Cost, Effective Tool for Geoscience Applications.” Geomorphology 179: 300–314. doi:10.1016/j.geomorph.2012.08.021.
Subjects: S Agriculture > SH Aquaculture. Fisheries. Angling
S Agriculture > SH Aquaculture. Fisheries. Angling > SH1-691 Aquaculture. Fisheries. Angling > SH20.3-191 Aquaculture
Divisions: 14. Fakultas Perikanan dan Kelautan > Akuakultur
Akhmad Taufiq Mukti, ,-NIDN0008037404
S. Andriyono, ,-UNSPECIFIED
F. F. Muhsoni, ,-UNSPECIFIED
Depositing User: ghishella ayu rahmawati
Date Deposited: 28 Apr 2023 03:22
Last Modified: 28 Apr 2023 03:22
Sosial Share:

Actions (login required)

View Item View Item