Next-generation sequencing yields the complete mitochondrial genome of mud spiny lobster, Panulirus polyphagus (Crustacea: Decapoda) from Madura water

Sapto Andriyono, ,- and M. J. Alam, ,- and Pramono Hadi Santoso, ,- and A. A. Abdillah and H. W. Kim, ,- (2019) Next-generation sequencing yields the complete mitochondrial genome of mud spiny lobster, Panulirus polyphagus (Crustacea: Decapoda) from Madura water. IOP Conf. Series: Earth and Environmental Science, 348. pp. 1-6. ISSN 755-1307

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Official URL: https://iopscience.iop.org/article/10.1088/1755-13...

Abstract

The circular mitochondrial genome of the mud spiny lobster, Panulirus polyphagus was determined by next-generation sequencing (NGS) platform. The mitochondrial genome of P. polyphagus was 15,707 bp in length, which comprised 13 protein-coding genes, 22 tRNAs, two ribosomal RNAs (12S and 16S). A non-coding putative control region (739 bp) was located between 12S ribosomal RNA and tRNA-Ile. Except for COX1, 13 protein-coding genes initiated with the conventional start codon (ATG). The phylogenetic analysis with the mitogenomes in family Palinuridae showed P. polyphagus was clustered together with four congener species forming a clade, and Panulirus versicolor is closest to P. polyphagus.

Item Type: Article
Subjects: S Agriculture > SH Aquaculture. Fisheries. Angling > SH1-691 Aquaculture. Fisheries. Angling
S Agriculture > SH Aquaculture. Fisheries. Angling > SH1-691 Aquaculture. Fisheries. Angling > SH20.3-191 Aquaculture
Divisions: 14. Fakultas Perikanan dan Kelautan > Kelautan
Creators:
CreatorsNIM
Sapto Andriyono, ,-0025097907
M. J. Alam, ,-UNSPECIFIED
Pramono Hadi Santoso, ,-060513443
A. A. AbdillahUNSPECIFIED
H. W. Kim, ,-UNSPECIFIED
Depositing User: anita erna faricha
Date Deposited: 28 Apr 2023 10:03
Last Modified: 28 Apr 2023 10:03
URI: http://repository.unair.ac.id/id/eprint/125260
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